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Multiple sequence alignment
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#	Item
111	Maximum Likelihood Estimation for Targeted Homology Search Peter Menzel1,2 , Jan Gorodkin1 , Peter F. Stadler2 Abstract Modelling the characteristic and conserved motifs of genes is in many cases still a manual task that Add to Reading List Source URL: www.bioinf.uni-leipzig.de Language: English - Date: 2009-09-23 09:12:04 Sequence alignment Multiple sequence alignment Bioinformatics Computational phylogenetics Markov models
112	A Practical Guide to Using TBA Elliott H. Margulies Minmei Hou Webb Miller Add to Reading List Source URL: www.bx.psu.edu Language: English - Date: 2005-04-28 14:40:39 Biostatistics Sequence alignment FASTA format BLAST Multiple sequence alignment FASTA STING Bioinformatics Computational phylogenetics Science
113	FastTree: Neighbor-Joining with Profiles instead of a Distance Matrix Morgan N Price∗1,2 , Paramvir S Dehal1,2 and Adam P Arkin1,2,3 1 Physical Biosciences Division, Lawrence Berkeley National Lab, 1 Cyclotron Road Mai Add to Reading List Source URL: meta.microbesonline.org Language: English - Date: 2008-04-24 15:12:01 Science Biology Matrices Neighbor joining Maximum parsimony Multiple sequence alignment Sequence alignment Distance matrix B-tree Computational phylogenetics Bioinformatics Phylogenetics
114	Comparative Analysisof ,Multiple Protein-Sequence AlignmentMethods Marcella A. MKiure, Taha K. Vasi,and Walter M. Filch Department of Ecology and Evolutivnary Biology, University of California, Irvine We have analyzed a Add to Reading List Source URL: www.virtual.unal.edu.co Language: English - Date: 2013-05-16 18:26:15 Biostatistics Sequence alignment Multiple sequence alignment Aspartate protease Protein domain STING Sequence analysis Protein family PRINTS Bioinformatics Biology Science
115	Nucleic Acids Research, 2007, Vol. 35, Web Server issue W675–W677 doi:nar/gkm267 eProbalign: generation and manipulation of multiple sequence alignments using partition function posterior probabilities Add to Reading List Source URL: www.ncbi.nlm.nih.gov Language: English Biostatistics Sequence alignment Multiple sequence alignment MUSCLE Clustal MAFFT ProbCons Nucleic acid structure prediction Phylo Computational phylogenetics Bioinformatics Science
116	33 A Randomized Algorithm for Distance Matrix Calculations in Multiple Sequence Alignment* Sanguthevar Rajasekaran, Vishal Thapar, Hardik Dave, and Chun-Hsi Huang School of Computer Science and Engineering, University o Add to Reading List Source URL: www.cse.uconn.edu Language: English - Date: 2004-10-13 08:46:16 Sequence alignment Multiple sequence alignment BLAST Smith–Waterman algorithm Needleman–Wunsch algorithm T-Coffee Phylo Fast Fourier transform FASTA Computational phylogenetics Bioinformatics Science
117	PDF Document Add to Reading List Source URL: www.virtual.unal.edu.co Language: English - Date: 2013-05-16 18:26:15 Computational science Multiple sequence alignment Sequence alignment Structural alignment Sequence analysis Needleman–Wunsch algorithm BLAST Bioinformatics Computational phylogenetics Science
118	PDF Document Add to Reading List Source URL: www.virtual.unal.edu.co Language: English - Date: 2013-05-16 18:26:16 Statistics Sequence alignment Substitution model Maximum likelihood Phylo Nucleic acid sequence Multiple sequence alignment BLAST Computational phylogenetics Bioinformatics Science
119	PDF Document Add to Reading List Source URL: math.agrocampus-ouest.fr Language: English - Date: 2011-12-19 09:51:19 Protein families Cell biology Cell signaling Sequence alignment Multiple sequence alignment Receptor Biology Bioinformatics Computational phylogenetics
120	Rapid Computation of Distance Estimators from Nucleotide and Amino Acid Alignments M. Simonsen C. N. S. Pedersen Add to Reading List Source URL: users-birc.au.dk Language: English - Date: 2011-04-11 06:03:44 Biology Sequence alignment Nucleic acid sequence Multiple sequence alignment Substitution model Phylo BLOSUM SIMD SSE2 Computational phylogenetics Bioinformatics Science

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